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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934563.1_cds_XP_016480596.1_72018
CDS Infomation

[gene=LOC107801735] [db_xref=GeneID:107801735] [protein=phospholipase A1-Igamma1, chloroplastic-like] [protein_id=XP_016480596.1] [location=complement(130701..132218)] [gbkey=CDS]
Sequence

ATGAAAGCAATCCACCACCTCCATACCACCCATCTCCACCATCTTAGCCACCAATTACAC
AACAATAGACTTTCCATGATCTATGCCTACAAAGATGGTTCAATTGAAACTCAAAGAAAA
ACCTCAAAGAAATCAAATAGACTAGGTGAAACATTATCAAACCTTTTAAACATTCAAAAA
CCATACCAAAAGATCAATAATCCTAGTACTTATTCAAATTGGAACACTTTGAACATTGAA
GACAAGGCTAACACACCTACCATGTCACCTAAGGAGGACATATCCGATCGATGGCGCGAC
ATTCATGGTGTTCAAGAATGGGAAGGTCTTCTTGATCCACTACACCCATTGCTTCGTCGA
GAAATTGTTAAATATGGCGAATTTGCTCAAGCAACTTATGATGCATTAGATTTCGACGCG
TTCTCAGAATATTGTGGAAGTTGCATGTATAATAGTCAAAAGTTGTTTGACAAGTTAGGA
CTTAGCAAAAGTGGCTATAAAGTTACCAAGTATATATATGCAATGTCACATATAGATATG
CCACAATGGCTTGAAAGATCAAGATTGACATATACATGGAGCAAAGATTCAAATTGGATT
GGTTTTGTTGCCGTGAGTGATGACGAAGAATCGCGACGAATTGGGAGGAGAGACATTGTT
GTGGCATGGAGAGGGACAGTGACACCTTCAGAATGGTATGAAAATATGCAGAGGAAATTA
GAGCCAATTGGGCATATGGACTCAAAAGTGGAACATGGTTTTCTTAGTATTTACACATCT
AAGAGTGATTCAACTAGGTATAACAAGTCAAGTGCATCAGAACAAGTTATGAAAGAATTG
AAAATATTGGTGGATTTTTACAAAAGCAAAGGTGAAGAAGTTAGCCTCACAATAACAGGA
CATAGCTTAGGGGGTGCACTAGCTCTCCTAAATGCTTATGAATCAGCAGCAAAATTTCCA
AGAATTCCAATTAGTGTTATTTCATTTGCAGCCCCAAGAGTTGGAAATATTGCATTTCGA
GACGAGATTTACCAAATGGGAGTCAAAATTTTACGCGTTACAGTAAAACAAGATTTAGTC
CCTCGAATGCCCGGAATAGTTTTTAATGAAAGTTTACAAAAATTTGATGATTTTACAGGG
ACATTGGAGTGGATTTACACACATGTTGGAGCAGAATTGAAGCTTGATGTTAGGTCTTCA
CCTTATCTTAAAAGGGGATTTAATTTCATAGGGTTTCATATGCTTGAGACATATCTTCAT
TTAGTAGATGGTTTTGTTAGTACAAGTTCAACATTTAGGTCTAATGCTAAAAGGGATGTA
GCATTAGTGAATAAGGAATGTGATATGCTTGTAGATGAGTTAAGAATTCCTAGTTGTTGG
TATCAATTGGCCAACAAGGGGTTAGAGTGCAATTCTTATGGTAGGTGGGTAAGGCCCAAA
AGAGATCCAGAAGATATTCCTTCACCTACTAGAGAAGATTATAGTTATGGATTGCAAGAA
ATTAGTTATGGATTTTGA

Peptide Sequence

PEP ID

XP_016480596.1
PEP Infomation

PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Nicotiana tabacum]
Sequence

MKAIHHLHTTHLHHLSHQLHNNRLSMIYAYKDGSIETQRKTSKKSNRLGETLSNLLNIQK
PYQKINNPSTYSNWNTLNIEDKANTPTMSPKEDISDRWRDIHGVQEWEGLLDPLHPLLRR
EIVKYGEFAQATYDALDFDAFSEYCGSCMYNSQKLFDKLGLSKSGYKVTKYIYAMSHIDM
PQWLERSRLTYTWSKDSNWIGFVAVSDDEESRRIGRRDIVVAWRGTVTPSEWYENMQRKL
EPIGHMDSKVEHGFLSIYTSKSDSTRYNKSSASEQVMKELKILVDFYKSKGEEVSLTITG
HSLGGALALLNAYESAAKFPRIPISVISFAAPRVGNIAFRDEIYQMGVKILRVTVKQDLV
PRMPGIVFNESLQKFDDFTGTLEWIYTHVGAELKLDVRSSPYLKRGFNFIGFHMLETYLH
LVDGFVSTSSTFRSNAKRDVALVNKECDMLVDELRIPSCWYQLANKGLECNSYGRWVRPK
RDPEDIPSPTREDYSYGLQEISYGF

Transcript Sequence

Gene sequence data has not been registered.